Package: castxml Version: 0.6.8-2 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 13472 Depends: libc6 (>= 2.38), libclang-cpp18 (>= 1:18.1.8), libllvm18, libstdc++6 (>= 13.1) Homepage: https://github.com/CastXML/CastXML Priority: optional Section: devel Filename: pool/main/c/castxml/castxml_0.6.8-2_amd64.deb Size: 798564 SHA256: 8b645422bf08a02a15906cd9a89a2d53dad65c6bed7752506e0027a37d04ebee SHA1: 84662d8204caf513676ab6133efa11ab09bd3b3d MD5sum: 2fecb1ee260ab657d07b5d0fe96ec2b6 Description: C-family abstract syntax tree XML output tool Parse C-family source files and optionally write a subset of the Abstract Syntax Tree (AST) to a representation in XML. This is the successor to gccxml. Package: civetweb Version: 1.16+dfsg-2 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 43 Depends: libcivetweb1 (= 1.16+dfsg-2), libc6 (>= 2.34) Homepage: https://github.com/civetweb/civetweb/ Priority: optional Section: web Filename: pool/main/c/civetweb/civetweb_1.16+dfsg-2_amd64.deb Size: 13180 SHA256: 394bd576a0853a22d5310528f7c1a2d88b2a10a4448aede40174cc918bebe5b0 SHA1: 77fc9ffa500f3ad8f78e2995b30bfab3cb64530d MD5sum: 01d8f4a3a27b93ef9d5ead71885138e4 Description: embeddable web server with optional CGI, SSL and Lua support CivetWeb is an easy to use, powerful, C (C/C++) embeddable web server with optional CGI, SSL and Lua support. CivetWeb has a MIT license so you can innovate without restrictions. . CivetWeb can be used by developers as a library, to add web server functionality to an existing application. . It can also be used by end users as a stand-alone web server running on a Windows or Linux PC. It is available as single executable, no installation is required. Package: csh Version: 20240808-1.1 Architecture: amd64 Maintainer: Alastair McKinstry Installed-Size: 344 Depends: libbsd0 (>= 0.7.0), libc6 (>= 2.38) Provides: c-shell Multi-Arch: foreign Homepage: https://www.openbsd.org/cgi-bin/cvsweb/src/bin/csh/ Priority: optional Section: shells Filename: pool/main/c/csh/csh_20240808-1.1_amd64.deb Size: 240404 SHA256: 66b23a446e6413002228a85d92c15e900379bf8fba8f12d37a5be55e140609f4 SHA1: b4f514c582ef72473dc0a465fea494dbbc2e731b MD5sum: 8b8867aa8779b0e3387db309fada75e8 Description: Shell with C-like syntax The C shell was originally written at UCB to overcome limitations in the Bourne shell. Its flexibility and comfort (at that time) quickly made it the shell of choice until more advanced shells like ksh, bash, zsh or tcsh appeared. Most of the latter incorporate features original to csh. . This package is based on current OpenBSD sources. Package: foot Version: 1.18.1-1+eml1 Architecture: amd64 Maintainer: Birger Schacht Installed-Size: 644 Depends: init-system-helpers (>= 1.52), libc6 (>= 2.38), libfcft4t64 (>= 3.0.1), libfontconfig1 (>= 2.12.6), libpixman-1-0 (>= 0.30.0), libutf8proc3 (>= 2.9.0), libwayland-client0 (>= 1.20.0), libwayland-cursor0 (>= 1.0.2), libxkbcommon0 (>= 1.0.0), ncurses-term (>= 6.4+20230625-2) Suggests: foot-themes Provides: x-terminal-emulator Homepage: https://codeberg.org/dnkl/foot Priority: optional Section: x11 Filename: pool/main/f/foot/foot_1.18.1-1+eml1_amd64.deb Size: 277088 SHA256: 352767538e7db8bf22affab617436aee92a7d1a7275af4051525342d112b4a1b SHA1: 06ab05a01e3e9df35ce9267789dd16e478c38832 MD5sum: 1bb355ed47003e08053143dfaa65f5b0 Description: Fast, lightweight and minimalistic Wayland terminal emulator The fast, lightweight and minimalistic Wayland terminal emulator. Features . * Fast * Lightweight, in dependencies, on-disk and in-memory * Wayland native * DE agnostic * User configurable font fallback * On-the-fly DPI font size adjustment * Scrollback search * Color emoji support * Server/daemon mode * Multi-seat * Synchronized Updates support * Sixel image support Package: foot-dbgsym Source: foot Version: 1.18.1-1+eml1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Birger Schacht Installed-Size: 723 Depends: foot (= 1.18.1-1+eml1) Priority: optional Section: debug Filename: pool/main/f/foot/foot-dbgsym_1.18.1-1+eml1_amd64.deb Size: 663456 SHA256: d4f215b7076cd6a62c79ddd9ea724a6a0e6f6e37c66e0df0853965d57d94c5f5 SHA1: bd23688c5efc11f09edbd5083da06dabd01e025d MD5sum: cf3a93a501a4e53eb93be772c0fd43b9 Description: debug symbols for foot Build-Ids: 157cb90b575b0318779bd6bdac202a0f987490a3 c005e56d40feb3c27c9d61a0997f1f6e924ce8f7 Package: foot-terminfo Source: foot Version: 1.18.1-1+eml1 Architecture: all Maintainer: Birger Schacht Installed-Size: 62 Depends: ncurses-term (>= 6.4+20230625-2) Breaks: foot (<< 1.5.3-2) Replaces: foot (<< 1.5.3-2) Homepage: https://codeberg.org/dnkl/foot Priority: optional Section: oldlibs Filename: pool/main/f/foot/foot-terminfo_1.18.1-1+eml1_all.deb Size: 45872 SHA256: da345e9b03e7e0ed6913c553a0678d1206df24f9e12a591816d66c42b8bf9b8f SHA1: e124c699efed122e61847d4ef0d640502d56b564 MD5sum: fda874251d52ac749e42a6b98fdaa80a Description: Fast, lightweight and minimalistic Wayland terminal emulator (terminfo files) This is a transitional package. It can safely be removed. The foot terminfo files are now shipped by ncurses-term. Package: foot-themes Source: foot Version: 1.18.1-1+eml1 Architecture: all Maintainer: Birger Schacht Installed-Size: 138 Homepage: https://codeberg.org/dnkl/foot Priority: optional Section: x11 Filename: pool/main/f/foot/foot-themes_1.18.1-1+eml1_all.deb Size: 58052 SHA256: 51c3504a635b167b240d42c96180f1ff98b172cfd6b575443f1d0011d2467a13 SHA1: 50d433ec2f0e0c7bec7c3008e4872dca375c74eb MD5sum: 393dd298e9bb3a924358b56b141157f9 Description: Fast, lightweight and minimalistic Wayland terminal emulator (theme files) The fast, lightweight and minimalistic Wayland terminal emulator. . This package contains theme files for foot. Package: libatomic-queue-dev Source: libatomic-queue Version: 1.6.4-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 370 Depends: libatomic-queue0 (= 1.6.4-1), libboost-dev Homepage: https://github.com/max0x7ba/atomic_queue Priority: optional Section: libdevel Filename: pool/main/liba/libatomic-queue/libatomic-queue-dev_1.6.4-1_amd64.deb Size: 65444 SHA256: 8fc577dbccb6fe4a1821f2ced54326598179d20df4df484e8e70a0d9fa639028 SHA1: 7f33c39369989b3ab40bb83c2fa708a18875ad6a MD5sum: 93405a5c4c25fdf13408cfe1d2d03cf2 Description: devel files for C++ atomic_queue library C++11 multiple-producer-multiple-consumer lockless queues based on circular buffer with std::atomic. The main design principle these queues follow is simplicity: the bare minimum of atomic operations, fixed size buffer, value semantics. . The circular buffer side-steps the memory reclamation problem inherent in linked-list based queues for the price of fixed buffer size. See Effective memory reclamation for lock-free data structures in C++ for more details. . These qualities are also limitations: . * The maximum queue size must be set at compile time or construction time. * There are no OS-blocking push/pop functions. . Nevertheless, ultra-low-latency applications need just that and nothing more. The simplicity pays off, see the throughput and latency benchmarks. . Available containers are: . * AtomicQueue - a fixed size ring-buffer for atomic elements. * OptimistAtomicQueue - a faster fixed size ring-buffer for atomic elements which busy-waits when empty or full. * AtomicQueue2 - a fixed size ring-buffer for non-atomic elements. * OptimistAtomicQueue2 - a faster fixed size ring-buffer for non-atomic elements which busy-waits when empty or full. . These containers have corresponding AtomicQueueB, OptimistAtomicQueueB, AtomicQueueB2, OptimistAtomicQueueB2 versions where the buffer size is specified as an argument to the constructor. . This package contains the header files and static library. Package: libatomic-queue0 Source: libatomic-queue Version: 1.6.4-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 188 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 11) Homepage: https://github.com/max0x7ba/atomic_queue Priority: optional Section: libs Filename: pool/main/liba/libatomic-queue/libatomic-queue0_1.6.4-1_amd64.deb Size: 57984 SHA256: d3dfefaa3e22f728805dc2c24b26599c83f1ba0c462ddb5a69ef802f30dda39c SHA1: a7b871003d8879e19e29194798faa03583034657 MD5sum: 474d1ca4654a494838d67bc12fbde83a Description: C++ atomic_queue library C++11 multiple-producer-multiple-consumer lockless queues based on circular buffer with std::atomic. The main design principle these queues follow is simplicity: the bare minimum of atomic operations, fixed size buffer, value semantics. . The circular buffer side-steps the memory reclamation problem inherent in linked-list based queues for the price of fixed buffer size. See Effective memory reclamation for lock-free data structures in C++ for more details. . These qualities are also limitations: . * The maximum queue size must be set at compile time or construction time. * There are no OS-blocking push/pop functions. . Nevertheless, ultra-low-latency applications need just that and nothing more. The simplicity pays off, see the throughput and latency benchmarks. . Available containers are: . * AtomicQueue - a fixed size ring-buffer for atomic elements. * OptimistAtomicQueue - a faster fixed size ring-buffer for atomic elements which busy-waits when empty or full. * AtomicQueue2 - a fixed size ring-buffer for non-atomic elements. * OptimistAtomicQueue2 - a faster fixed size ring-buffer for non-atomic elements which busy-waits when empty or full. . These containers have corresponding AtomicQueueB, OptimistAtomicQueueB, AtomicQueueB2, OptimistAtomicQueueB2 versions where the buffer size is specified as an argument to the constructor. . This package contains the dynamic library. Package: libcivetweb-dev Source: civetweb Version: 1.16+dfsg-2 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 130 Depends: libcivetweb1 (= 1.16+dfsg-2) Multi-Arch: same Homepage: https://github.com/civetweb/civetweb/ Priority: optional Section: libdevel Filename: pool/main/c/civetweb/libcivetweb-dev_1.16+dfsg-2_amd64.deb Size: 26980 SHA256: 52202b96af51d52725d5811ef893080ca14964f965f483f4cff74dd5b3810880 SHA1: f591dfaaf1d4797c40f0fb6b6704ac034b6009fd MD5sum: 39410081ceec93e3db0132116c43e540 Description: embeddable web server with optional CGI, SSL and Lua support (devel) CivetWeb is an easy to use, powerful, C (C/C++) embeddable web server with optional CGI, SSL and Lua support. CivetWeb has a MIT license so you can innovate without restrictions. . CivetWeb can be used by developers as a library, to add web server functionality to an existing application. . It can also be used by end users as a stand-alone web server running on a Windows or Linux PC. It is available as single executable, no installation is required. . This package contains the header file for developing applications using civetweb. Package: libcivetweb1 Source: civetweb Version: 1.16+dfsg-2 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 251 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2) Multi-Arch: same Homepage: https://github.com/civetweb/civetweb/ Priority: optional Section: libs Filename: pool/main/c/civetweb/libcivetweb1_1.16+dfsg-2_amd64.deb Size: 92284 SHA256: a8ae72b51a25febfe74c8614d0c93dd95e4ee5d2da76179323ea77ffb1ea292b SHA1: 7393b9b49b4975118454f8f1a817f5b82e5420c3 MD5sum: c5a1a5c8592e092c1f1a935ed2503b96 Description: embeddable web server with optional CGI, SSL and Lua support (lib) CivetWeb is an easy to use, powerful, C (C/C++) embeddable web server with optional CGI, SSL and Lua support. CivetWeb has a MIT license so you can innovate without restrictions. . CivetWeb can be used by developers as a library, to add web server functionality to an existing application. . It can also be used by end users as a stand-alone web server running on a Windows or Linux PC. It is available as single executable, no installation is required. . This package contains the shared library for civetweb. Package: libedf-dev Source: edflib Version: 1.27-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 248 Depends: libedf1 (= 1.27-1) Multi-Arch: same Homepage: https://www.teuniz.net/edflib/ Priority: optional Section: libdevel Filename: pool/main/e/edflib/libedf-dev_1.27-1_amd64.deb Size: 46256 SHA256: 2a1d6d0d5f596d97032ea96b22307525dc7f9e08db873872cfb13337c164126b SHA1: 0fac03ff56595c3b37e0a7da3da3c1f0215afba9 MD5sum: b2c901d8828f40b6265e789ae199b647 Description: European Data Format library - devel EDFlib is a programming library for C/C++ to read/write EDF+/BDF+ files. (It also reads old-type EDF/BDF files.) EDF means European Data Format. BDF is the 24-bits version of EDF. . Headers and shared libraries for edflib. Package: libedf1 Source: edflib Version: 1.27-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 89 Depends: libc6 (>= 2.14) Breaks: edfbrowser (<< 1.95) Multi-Arch: same Homepage: https://www.teuniz.net/edflib/ Priority: optional Section: libs Filename: pool/main/e/edflib/libedf1_1.27-1_amd64.deb Size: 34464 SHA256: 118ebbb76812bbfa0eeccd5ba0ac26f656a4b29991aa18cfa9735d5a6eecaf27 SHA1: 72b9982174d41aa0e674c37cdff25f4e87f93994 MD5sum: c00cee34613315ef0dc4f60a3df7db79 Description: European Data Format library - libs EDFlib is a programming library for C/C++ to read/write EDF+/BDF+ files. (It also reads old-type EDF/BDF files.) EDF means European Data Format. BDF is the 24-bits version of EDF. . This package contains the libraries needed to run EDF+/BDF+ applications. Package: libjam-java Source: jam-lib Version: 0.1.git20240425.aec45be+dfsg-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 217 Homepage: https://github.com/rambaut/jam-lib Priority: optional Section: java Filename: pool/main/j/jam-lib/libjam-java_0.1.git20240425.aec45be+dfsg-1_all.deb Size: 168096 SHA256: 9ddbc0a18000036878fc84b915e1aaf1dca855d369bfd86620376ade221ce0ba SHA1: 6b9f6d2e45043e77d29a3ea28af3cf172d86d916 MD5sum: 038766816bdcc142fc27081a23d600f4 Description: Java applications look and behave like native applications JAM provides classes for building desktop applications that look and behave like native applications. applications created using JAM will look native on Mac, Windows and Linux/UNIX machines. Package: libjam-java-doc Source: jam-lib Version: 0.1.git20240425.aec45be+dfsg-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 4757 Depends: libjs-jquery, libjs-jquery-ui Homepage: https://github.com/rambaut/jam-lib Priority: optional Section: doc Filename: pool/main/j/jam-lib/libjam-java-doc_0.1.git20240425.aec45be+dfsg-1_all.deb Size: 111060 SHA256: 0fe3c2051a11c43020a80a989fe56044fa6ab7385c999bf7fd14c6243f16038a SHA1: 1b58a8ad8607923204d3fdf7918350a0c76f371b MD5sum: 0e136238d9ace7aa159be453bf831960 Description: Java applications look and behave like native applications (documentation) JAM provides classes for building desktop applications that look and behave like native applications. applications created using JAM will look native on Mac, Windows and Linux/UNIX machines. . This package provides the documentation for the library Package: libmdc-dev Source: xmedcon Version: 0.24.0-gtk3+dfsg-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 1800 Depends: libmdc3t64 (= 0.24.0-gtk3+dfsg-1) Provides: libmdc2-dev Homepage: https://xmedcon.sourceforge.net/ Priority: optional Section: libdevel Filename: pool/main/x/xmedcon/libmdc-dev_0.24.0-gtk3+dfsg-1_amd64.deb Size: 350860 SHA256: 1b4418726f155d43ac2eae30f966058fe1d9092b438c9aff7796c384c70baab1 SHA1: cc71830295546ec18bc13baa7982075920ed3e01 MD5sum: 1298dd8789f8f6ecaf921b279917d321 Description: Medical Image (DICOM, ECAT, ...) conversion tool (development) This project stands for Medical Image Conversion. Released under the (L)GPL, it comes with the full C-source code of the library, a flexible command line utility and a neat graphical front-end using the GTK+ toolkit. The currently supported formats are: Acr/Nema 2.0, Analyze (SPM), DICOM 3.0, InterFile 3.3 and PNG. . Static library, include files and documentation for developers. Package: libmdc3t64 Source: xmedcon Version: 0.24.0-gtk3+dfsg-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 866 Depends: libc6 (>= 2.38), libglib2.0-0t64 (>= 2.12.0), libniftiio2t64 (>= 3.0.1), libpng16-16t64 (>= 1.6.2), libznz3 (>= 3.0.1) Conflicts: libmdc3 (<< 0.24.0-gtk3+dfsg-1) Replaces: libmdc3 Provides: libmdc3 (= 0.24.0-gtk3+dfsg-1) Multi-Arch: same Homepage: https://xmedcon.sourceforge.net/ Priority: optional Section: libs Filename: pool/main/x/xmedcon/libmdc3t64_0.24.0-gtk3+dfsg-1_amd64.deb Size: 260364 SHA256: fe6c7e14912fc58806db213eeee54d1aaffb377d3e9d58dded182a21235e364a SHA1: d0c45864cc9d8975db08bf282dadbd9cec57bb1d MD5sum: 05678941a0c4ca0ee0ed77357c834c91 Description: Medical Image (DICOM, ECAT, ...) conversion tool (library) This project stands for Medical Image Conversion. Released under the (L)GPL, it comes with the full C-source code of the library, a flexible command line utility and a neat graphical front-end using the GTK+ toolkit. The currently supported formats are: Acr/Nema 2.0, Analyze (SPM), DICOM 3.0, InterFile 3.3 and PNG. . This is the central library needed by medcon, xmedcon and derived programs. Package: libsprng2 Source: sprng Version: 2.0a-15.1 Architecture: amd64 Maintainer: Dirk Eddelbuettel Installed-Size: 151 Depends: libc6 (>= 2.14), libgmp10 (>= 2:6.3.0+dfsg) Homepage: http://www.sprng.org/ Priority: optional Section: libs Filename: pool/main/s/sprng/libsprng2_2.0a-15.1_amd64.deb Size: 75404 SHA256: 2b8b4f5ee3a667e7a7dc9b567e39c9e18e29e4ec2efee9e7d8f9039c1cb423f8 SHA1: 3a0c8e4121fe5be354a17ad3ae8b5c608ffee7aa MD5sum: 1d984959f54a87eb5ff5657f11bb9449 Description: SPRNG Scalable Parallel RNG library -- library package The SPRNG (Scalable Parallel Random Number Generator) library provides several RNGs that are suitable for use in parallel computing. . URL: http://sprng.cs.fsu.edu . This package provides the shared libraries needed to execute programs built with SPRNG. Package: libsprng2-dbgsym Source: sprng Version: 2.0a-15.1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Dirk Eddelbuettel Installed-Size: 23 Depends: libsprng2 (= 2.0a-15.1) Priority: optional Section: debug Filename: pool/main/s/sprng/libsprng2-dbgsym_2.0a-15.1_amd64.deb Size: 4448 SHA256: 01b69b0767af3767e7046446455bce533e4d1cad3f71377ab725fd252938ba91 SHA1: d3773a6e67867f2d036b2531d4967a33a89cc7ba MD5sum: c653e41a9a5bc90f4f0babf25bc95a02 Description: debug symbols for libsprng2 Build-Ids: 8e919c4853d58e0566cc108b6bea7e83a6925f8d Package: libsprng2-dev Source: sprng Version: 2.0a-15.1 Architecture: amd64 Maintainer: Dirk Eddelbuettel Installed-Size: 202 Depends: libsprng2 (= 2.0a-15.1), libgmp-dev Suggests: libsprng2-doc Homepage: http://www.sprng.org/ Priority: optional Section: libdevel Filename: pool/main/s/sprng/libsprng2-dev_2.0a-15.1_amd64.deb Size: 78728 SHA256: d26e9d21712233a9f36cee96f52f7923c44dc9e2dd94ebba546889e5b18b5e5e SHA1: bc3efb9f9a23bf9562ee18c643f5652e87a42a9c MD5sum: dbf3ffb24f5241c55ef82859172f899b Description: SPRNG Scalable Parallel RNG library -- development package The SPRNG (Scalable Parallel Random Number Generator) library provides several RNGs that are suitable for use in parallel computing. . URL: http://sprng.cs.fsu.edu . This package contains the header files, static libraries and symbolic links that are need to compile programs using the SPRNG library. Package: libsprng2-doc Source: sprng Version: 2.0a-15.1 Architecture: all Maintainer: Dirk Eddelbuettel Installed-Size: 1388 Homepage: http://www.sprng.org/ Priority: optional Section: doc Filename: pool/main/s/sprng/libsprng2-doc_2.0a-15.1_all.deb Size: 1158004 SHA256: 3b9e9f7c452096831b28567f631d75494358ceb4b10d2143ffdacd2791ef6d52 SHA1: a4f32f0de39d57b0e78a03f82a4fd12b8ff71dfc MD5sum: b66107ddfc4481d5497f76588473ece5 Description: SPRNG Scalable Parallel RNG library -- documentation package The SPRNG (Scalable Parallel Random Number Generator) library provides several RNGs that are suitable for use in parallel computing. . URL: http://sprng.cs.fsu.edu . This package contains files from the docs, examples and tests directories included in the source distribution. Package: libstatgen-dev Source: libstatgen Version: 1.0.15-7 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 753 Depends: libstatgen1 (= 1.0.15-7) Suggests: libstatgen-doc Multi-Arch: same Homepage: https://genome.sph.umich.edu/wiki/C++_Library:_libStatGen Priority: optional Section: libdevel Filename: pool/main/libs/libstatgen/libstatgen-dev_1.0.15-7_amd64.deb Size: 121788 SHA256: 2582e5cd2a013d2869719b9ea2e5c7f3e298c1a453212bf1c731f30bb5b95c11 SHA1: 5be2635ec05d3b4275d1370ad07f889f4fad0843 MD5sum: 0bee1e7e5f3a457908e0356aca623cd8 Description: development files for the libStatGen libStatGen is a library for statistical genetic programs. It includes some: A. General Operation Classes including: File/Stream I/O, String processing and Parameter Parsing. B. Statistical Genetic Specific Classes including: Handling Common file formats (Accessors to get/set values, Indexed access to BAM files) and some utility classes, including: 1. Cigar: interpretation and mapping between query and reference. 2. Pileup: structured access to data by individual reference position. . This package provides the development files for libstatgen. Package: libstatgen-doc Source: libstatgen Version: 1.0.15-7 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 27051 Recommends: libstatgen-dev (>= 1.0.15-7) Multi-Arch: foreign Homepage: https://genome.sph.umich.edu/wiki/C++_Library:_libStatGen Priority: optional Section: doc Filename: pool/main/libs/libstatgen/libstatgen-doc_1.0.15-7_all.deb Size: 1465012 SHA256: 3da4347b5d7d65ee8c20133954490503e5a47c7e694d72670ad60e224b5ff2f1 SHA1: d991cf5a430e410654c1e688b578d9594fb3f976 MD5sum: 9a1311fcd79b6ae8c8305203b01ba456 Description: documentation files for the libStatGen libStatGen is a library for statistical genetic programs. It includes some: A. General Operation Classes including: File/Stream I/O, String processing and Parameter Parsing. B. Statistical Genetic Specific Classes including: Handling Common file formats (Accessors to get/set values, Indexed access to BAM files) and some utility classes, including: 1. Cigar: interpretation and mapping between query and reference. 2. Pileup: structured access to data by individual reference position. . This package provides the documentation files for libstatgen. Package: libstatgen1 Source: libstatgen Version: 1.0.15-7 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 967 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 13.1) Multi-Arch: same Homepage: https://genome.sph.umich.edu/wiki/C++_Library:_libStatGen Priority: optional Section: libs Filename: pool/main/libs/libstatgen/libstatgen1_1.0.15-7_amd64.deb Size: 316156 SHA256: a28a54290ef395faa61294368b3f6fe28bab23d7e4c91dc300ae636b7b784f28 SHA1: 691e5ddab3f76b6ef2272b67df58c2b705503d85 MD5sum: 4f1f8f3e10b76570e569525c18b1018f Description: processing and analyzing next generation sequencing and genotyping data library libStatGen is a library for statistical genetic programs. It includes some: A. General Operation Classes including: File/Stream I/O, String processing and Parameter Parsing. B. Statistical Genetic Specific Classes including: Handling Common file formats (Accessors to get/set values, Indexed access to BAM files) and some utility classes, including: 1. Cigar: interpretation and mapping between query and reference. 2. Pileup: structured access to data by individual reference position. . This package provides the shared library. Package: medcon Source: xmedcon Version: 0.24.0-gtk3+dfsg-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 49 Depends: libc6 (>= 2.34), libmdc3t64 (>= 0.24.0-gtk3+dfsg) Suggests: xmedcon Homepage: https://xmedcon.sourceforge.net/ Priority: optional Section: graphics Filename: pool/main/x/xmedcon/medcon_0.24.0-gtk3+dfsg-1_amd64.deb Size: 21276 SHA256: 44688394b4b01cce6954ec368ee9a0fd7f228163c2b93d2c5a69fe96a4a14857 SHA1: de8b6445e052034f04301d7aff4bcdaa0f665d74 MD5sum: ead82166501883607bcb32dda86a51fe Description: Medical Image (DICOM, ECAT, ...) conversion tool This project stands for Medical Image Conversion. Released under the (L)GPL, it comes with the full C-source code of the library, a flexible command line utility and a neat graphical front-end using the GTK+ toolkit. The currently supported formats are: Acr/Nema 2.0, Analyze (SPM), DICOM 3.0, InterFile 3.3 and PNG. . The program also allows one to read unsupported files without compression, to print pixel values or to extract/reorder specified images. It is possible to retrieve the raw binary/ascii image arrays or to write PNG for desktop applications. . This is the command line tool for batch processing. Package: python-dask-doc Source: dask Version: 2024.7.1+dfsg-1 Architecture: all Maintainer: Debian Python Team Installed-Size: 79274 Depends: libjs-mathjax, node-js-yaml, libjs-sphinxdoc (>= 7.3) Homepage: https://github.com/dask/dask Priority: optional Section: doc Filename: pool/main/d/dask/python-dask-doc_2024.7.1+dfsg-1_all.deb Size: 11202168 SHA256: 81d153a7eaf0904c599268b44338bb41e57867609829652749564719324d79d9 SHA1: 594c22a2bac34a76d385108682a63f1c7000df59 MD5sum: 77e23192c8f3587723b756a8fd673ac4 Description: Minimal task scheduling abstraction documentation Dask is a flexible parallel computing library for analytics, containing two components. . 1. Dynamic task scheduling optimized for computation. This is similar to Airflow, Luigi, Celery, or Make, but optimized for interactive computational workloads. 2. "Big Data" collections like parallel arrays, dataframes, and lists that extend common interfaces like NumPy, Pandas, or Python iterators to larger-than-memory or distributed environments. These parallel collections run on top of the dynamic task schedulers. . This contains the documentation Package: python-nipype-doc Source: nipype Version: 1.9.0-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 13018 Depends: libjs-jquery, libjs-underscore Suggests: python3-nipype Multi-Arch: foreign Homepage: https://nipype.readthedocs.io/en/latest/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_1.9.0-1_all.deb Size: 1251208 SHA256: f8cfc74aab170c8160ec99cfdfaa6dd9c14d3debe08ae0afe260c9d5a121fc1a SHA1: 3786f52f6352289e4dcdb60de90eb2f06e391c98 MD5sum: 8cd91bcb4da1f356996c1ebdcd6be468 Description: Neuroimaging data analysis pipelines in Python3 -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python-parsl-doc Source: python-parsl Version: 2024.07.22+ds-1 Architecture: all Maintainer: Debian Python Team Installed-Size: 12066 Depends: libjs-jquery (>= 3.6.0), libjs-sphinxdoc (>= 7.3), sphinx-rtd-theme-common (>= 2.0.0+dfsg), python3-parsl, libjs-requirejs Homepage: https://github.com/Parsl/parsl Priority: optional Section: doc Filename: pool/main/p/python-parsl/python-parsl-doc_2024.07.22+ds-1_all.deb Size: 7703992 SHA256: 3506d6bd1c6211ff3bdc27168d64a0400c34980a014351388572e492cdc8d33a SHA1: 7f6497be7f58480308c07c8fe32c8b5b45f5de2f MD5sum: b4a9ace28b3ab6203b830a165d501b59 Description: Parallel Scripting Library for Python - documentation Parsl extends parallelism in Python beyond a single computer. . One can use Parsl just like Python's parallel executors but across multiple cores and nodes. However, the real power of Parsl is in expressing multi-step workflows of functions. Parsl lets one chain functions together and will launch each function as inputs and computing resources are available. . This package provides a locally readable Parsl documentation. Package: python3-dask Source: dask Version: 2024.7.1+dfsg-1 Architecture: all Maintainer: Debian Python Team Installed-Size: 5116 Depends: python3-fsspec, python3-toolz, python3-click, python3-cloudpickle, python3-importlib-metadata | python3-supported-min (>= 3.12), python3-packaging, python3-partd, python3-yaml, python3:any Recommends: python3-numpy, python3-pandas, python3-requests Suggests: ipython, python-dask-doc, python3-blosc, python3-boto3, python3-distributed, python3-graphviz, python3-h5py, python3-jinja2, python3-psutil, python3-scipy, python3-skimage, python3-sklearn, python3-sqlalchemy, python3-tables Homepage: https://github.com/dask/dask Priority: optional Section: python Filename: pool/main/d/dask/python3-dask_2024.7.1+dfsg-1_all.deb Size: 947940 SHA256: eaf25b259cdf975798ddb929689b895fa293ef5f122cd7a2fb2213542e76b5c6 SHA1: d6950e001342b82d37a4e8fdc212b8b105b615db MD5sum: 1b13a3f40342d7e008d3de7581d3afbd Description: Minimal task scheduling abstraction for Python 3 Dask is a flexible parallel computing library for analytics, containing two components. . 1. Dynamic task scheduling optimized for computation. This is similar to Airflow, Luigi, Celery, or Make, but optimized for interactive computational workloads. 2. "Big Data" collections like parallel arrays, dataframes, and lists that extend common interfaces like NumPy, Pandas, or Python iterators to larger-than-memory or distributed environments. These parallel collections run on top of the dynamic task schedulers. . This contains the Python 3 version. Package: python3-hdmf Source: hdmf Version: 3.14.4-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 1093 Depends: python3-h5py (>= 2.10), python3-importlib-resources | python3-supported-min (>= 3.9), python3-jsonschema, python3-numpy, python3-pandas, python3-scipy, python3:any, python3-dateutil, python3-ruamel.yaml Homepage: https://github.com/hdmf-dev/hdmf Priority: optional Section: python Filename: pool/main/h/hdmf/python3-hdmf_3.14.4-1_all.deb Size: 295348 SHA256: be3f6cb05e1f4c7c2a81d6e8f8920845fbb4b0fff468354283da686421a6d131 SHA1: 47cb78f2b7faf3c81906781fb20f4fbead145584 MD5sum: 14f49dedb352ef84f6cbbb9a60cd7d33 Description: Hierarchical Data Modeling Framework The Hierarchical Data Modeling Framework (HDMF) is a Python package for working with hierarchical data. It provides APIs for specifying data models, reading and writing data to different storage backends, and representing data with Python object. Package: python3-nipype Source: nipype Version: 1.9.0-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 10892 Depends: python3-click, python3-dateutil, python3-etelemetry, python3-filelock, python3-looseversion, python3-networkx, python3-nibabel, python3-numpy, python3-packaging, python3-prov, python3-puremagic, python3-rdflib, python3-scipy, python3-simplejson, python3-traits, python3:any, python3-dipy, python3-psutil Recommends: ipython3, python3-pytest, graphviz, python3-xvfbwrapper, mayavi2, python3-pydotplus, python3-pydot, python3-cfflib Suggests: afni, python3-nipy, slicer, matlab-spm8, python3-pyxnat, mne-python, elastix, ants, python3-pytest-xdist, python3-bids Homepage: https://nipype.readthedocs.io/en/latest/ Priority: optional Section: python Filename: pool/main/n/nipype/python3-nipype_1.9.0-1_all.deb Size: 1863604 SHA256: 43f082abc64fd8ff6991fbb65962eb8a636fb2d3a0d647200fbdb19fc4d61a36 SHA1: f424c081c6fed79902270b8f5cd3923636ce23b6 MD5sum: 96a2ad5fc2b70323fa6bc928fcd7dbfa Description: Neuroimaging data analysis pipelines in Python3 Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python3-parsl Source: python-parsl Version: 2024.07.22+ds-1 Architecture: all Maintainer: Debian Python Team Installed-Size: 1783 Depends: python3-dill, python3-filelock, python3-globus-sdk, python3-paramiko, python3-psutil, python3-requests, python3-setproctitle, python3-tblib, python3-typeguard, python3-typing-extensions, python3-zmq, python3:any, libjs-bootstrap, libjs-jquery, libjs-popper.js, node-fortawesome-fontawesome-free, python3-flask, python3-flask-sqlalchemy Recommends: r-cran-plotly Homepage: https://github.com/Parsl/parsl Priority: optional Section: python Filename: pool/main/p/python-parsl/python3-parsl_2024.07.22+ds-1_all.deb Size: 282580 SHA256: 58539a7cf39b04983e40ed1c88f126754e95b4780c141ec5f68f8327c3799fa0 SHA1: 2859a6aa85167a7b0bffa7f70edafb7c2bb33526 MD5sum: 558ff8f6716330eea6e16b480d7f562b Description: Parallel Scripting Library for Python Parsl extends parallelism in Python beyond a single computer. . One can use Parsl just like Python's parallel executors but across multiple cores and nodes. However, the real power of Parsl is in expressing multi-step workflows of functions. Parsl lets one chain functions together and will launch each function as inputs and computing resources are available. Package: python3-py2bit Source: python-py2bit Version: 0.3.1-3 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 108 Depends: python3 (<< 3.13), python3 (>= 3.11~), python3:any, libc6 (>= 2.33) Homepage: https://github.com/deeptools/py2bit/ Priority: optional Section: python Filename: pool/main/p/python-py2bit/python3-py2bit_0.3.1-3_amd64.deb Size: 20604 SHA256: 1375d1fc40d387e2a87da9cb0be774ba0f4a3d3175f566088ec5e46be0617ec6 SHA1: 8541ef6c62fabf9950ef80c6d7af59d82e208170 MD5sum: 68fac347f0e6dcd136ef54e8745e7a4f Description: access to 2bit files From https://genome.ucsc.edu/FAQ/FAQformat.html#format7: A .2bit file stores multiple DNA sequences (up to 4 Gb total) in a compact randomly-accessible format. The file contains masking information as well as the DNA itself. Package: python3-pyzstd Source: python-pyzstd Version: 0.16.0+ds-2 Architecture: amd64 Maintainer: Debian Python Team Installed-Size: 275 Depends: python3 (<< 3.13), python3 (>= 3.11~), python3:any, libc6 (>= 2.14), libzstd1 (>= 1.5.5) Homepage: https://github.com/Rogdham/pyzstd Priority: optional Section: python Filename: pool/main/p/python-pyzstd/python3-pyzstd_0.16.0+ds-2_amd64.deb Size: 59040 SHA256: 628204aa9d2e70f18c8329f5b542525a5a8cf2a4f0294de694cba0360a5cd52f SHA1: 7085de7e323b03a50864f931ea811efcc265818e MD5sum: 7bf4d237e6619fbc2edb4badd16254ff Description: Facebook's Zstandard (or zstd as short name) algorithm Python bindings to Zstandard (zstd) compression library, the API style is similar to Python's bz2/lzma/zlib modules. . Pyzstd module provides classes and functions for compressing and decompressing data, using Facebook's Zstandard (or zstd as short name) algorithm. Package: python3-trx-python Source: python-trx-python Version: 0.3-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 211 Depends: python3-deepdiff, python3-nibabel, python3-numpy, python3-setuptools-scm, python3:any Recommends: python3-dipy Homepage: https://tee-ar-ex.github.io/trx-python/index.html Priority: optional Section: python Filename: pool/main/p/python-trx-python/python3-trx-python_0.3-1_all.deb Size: 40248 SHA256: a67995c57cb5800b19f663f229981f810a614dc8fb19ca5ff19d4da63109165d SHA1: 37b508dcba13f0b70d7f9e06b4bedad2ee1f1ff1 MD5sum: ba54900ea2e063d84603c04ac43e69bd Description: implementation of the trx file-format for tractography data TRX is a tractography file format designed to facilitate dataset exchange, interoperability, and state-of-the-art analyses, acting as a community-driven replacement for the myriad existing file formats. . This package contains the Python implementation of the trx file-format. Package: xmedcon Version: 0.24.0-gtk3+dfsg-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 191 Depends: libc6 (>= 2.34), libcairo2 (>= 1.10.0), libgdk-pixbuf-2.0-0 (>= 2.22.0), libglib2.0-0t64 (>= 2.16.0), libgtk-3-0t64 (>= 3.21.4), libmdc3t64 (>= 0.24.0-gtk3+dfsg) Recommends: medcon Breaks: medcon (<< 0.24) Replaces: medcon (<< 0.24) Homepage: https://xmedcon.sourceforge.net/ Priority: optional Section: graphics Filename: pool/main/x/xmedcon/xmedcon_0.24.0-gtk3+dfsg-1_amd64.deb Size: 60676 SHA256: ee9f7d047cae1541728896e64814cb0abfdecc06e566dc078c1ffed880a7fffd SHA1: 48376f10728988c6726b1ae75bd83535768585f4 MD5sum: bbfafb818612582cb20cd1da7b24157d Description: Medical Image (DICOM, ECAT, ...) conversion tool (GUI) This project stands for Medical Image Conversion. Released under the (L)GPL, it comes with the full C-source code of the library, a flexible command line utility and a neat graphical front-end using the GTK+ toolkit. The currently supported formats are: Acr/Nema 2.0, Analyze (SPM), DICOM 3.0, InterFile 3.3 and PNG. . The program also allows one to read unsupported files without compression, to print pixel values or to extract/reorder specified images. It is possible to retrieve the raw binary/ascii image arrays or to write PNG for desktop applications. . This is the program version for X based on GTK+. Processes only one file at a time.